PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009608534.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 325aa    MW: 36192 Da    PI: 10.0763
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009608534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.69.2e-32254311359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  XP_009608534.1 254 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 311
                     99************************988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.2E-18204250IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.4E-33240311IPR003657WRKY domain
PROSITE profilePS5081131.054247313IPR003657WRKY domain
SuperFamilySSF1182903.53E-27249311IPR003657WRKY domain
SMARTSM007742.7E-38252312IPR003657WRKY domain
PfamPF031062.8E-27254310IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MAVELMMDYG NTRNCTFVTK LEEKAVVQEA SSGLESVEKL IRLLSQTQSQ QIQHQKQGYL  60
KQNNSPMEIE TVANAAVTKF KKVISLLDRN RTGHARFRRA PVASSSSQNP TKDYVDTKVY  120
YPTPIQQIPL VSYENYSQQL PLVPKTISFS YSPEMSRTNS FNISTLTGET ESKQHSSSSA  180
FQITNLSQVS NSAGRPPLSS SSLKRKCSSS ENAVSGKCSG SSGRCHCSKR RKLRLKRVVR  240
VPAISMKMAD IPPDDYSWRK YGQKPIKGSP HPRGYYKCSS VRGCPARKHV ERALDDPTML  300
IVTYEGEHNH SLSVAETSSL ILESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21240312273WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ8743930.0KJ874393.1 Nicotiana tabacum putative WRKY transcription factor 7 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009608534.10.0PREDICTED: probable WRKY transcription factor 7
RefseqXP_016498573.10.0PREDICTED: probable WRKY transcription factor 7
SwissprotQ9STX07e-97WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A077DBK70.0A0A077DBK7_TOBAC; Putative WRKY transcription factor 7
STRINGPGSC0003DMT4000642560.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.14e-79WRKY DNA-binding protein 15